Pure and Applied Chemistry

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• Faraji Shirin, Dreuw Andreas: Physicochemical Mechanism of Light-Driven DNA Repair by (6-4) Photolyases. Annu. Rev. Phys. Chem. 2014, 65, 275. <http://dx.doi.org/10.1146/annurev-physchem-040513-103626>
• Liu Xiu-Ling, Wang Jian-Bo, Tong Yao, Song Qin-Hua: Regioselectivity and Competition of the Paternò-Büchi Reaction and Triplet-Triplet Energy Transfer between Triplet Benzophenones and Pyrimidines: Control by Triplet Energy Levels. Chem. Eur. J. 2013, 19, 13216. <http://dx.doi.org/10.1002/chem.201300958>
• Faraji Shirin, Wirz Lukas, Dreuw Andreas: Quantum Chemical Study of the Enzymatic Repair of T(6-4)C/C(6-4)T UV-Photolesions by DNA Photolyases. ChemPhysChem 2013, 14, 2817. <http://dx.doi.org/10.1002/cphc.201300223>
• Delchev Vassil B., Domcke Wolfgang: Ab initio study of the cyclodimerization of uracil through butane-like and oxetane-like conical intersections. Journal of Photochemistry and Photobiology A: Chemistry 2013, 271, 1. <http://dx.doi.org/10.1016/j.jphotochem.2013.07.015>
• Faraji Shirin, Groenhof Gerrit, Dreuw Andreas: Combined QM/MM Investigation on the Light-Driven Electron-Induced Repair of the (6–4) Thymine Dimer Catalyzed by DNA Photolyase. J. Phys. Chem. B 2013, 117, 10071. <http://dx.doi.org/10.1021/jp401662z>
• Harbach Philipp H. P., Schneider Matthias, Faraji Shirin, Dreuw Andreas: Intermolecular Coulombic Decay in Biology: The Initial Electron Detachment from FADH– in DNA Photolyases. J. Phys. Chem. Lett. 2013, 4, 943. <http://dx.doi.org/10.1021/jz400104h>
• Dreuw Andreas, Faraji Shirin: A quantum chemical perspective on (6-4) photolesion repair by photolyases. Phys. Chem. Chem. Phys. 2013, 15, 19957. <http://dx.doi.org/10.1039/c3cp53313a>
• Faraji Shirin, Dreuw Andreas: Proton-Transfer-Steered Mechanism of Photolesion Repair by (6–4)-Photolyases. Journal of Physical Chemistry Letters 2012, 3, 227. <http://dx.doi.org/10.1021/jz201587v>
• Das S: Potential of the homeopathic remedy, Arnica Montana 30C, to reduce DNA damage in Escherichia coli exposed to ultraviolet irradiation through up-regulation of nucleotide excision repair genes. J Chin Integr Med 2012, 10, 337. <http://dx.doi.org/10.3736/jcim20120314>
• Rudiuk Sergii, Franceschi-Messant Sophie, Chouini-Lalanne Nadia, Perez Emile, Rico-Lattes Isabelle: DNA Photo-oxidative Damage Hazard in Transfection Complexes. Photochem Pholobiol 2011, 87, 103. <http://dx.doi.org/10.1111/j.1751-1097.2010.00831.x>
• Malhomme de la Roche Helena, Seagrove Susan, Mehta Anisha, Divekar Preshita, Campbell Sandra, Curnow Alison: Using natural dietary sources of antioxidants to protect against ultraviolet and visible radiation-induced DNA damage: An investigation of human green tea ingestion. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2010, 101, 169. <http://dx.doi.org/10.1016/j.jphotobiol.2010.04.006>
• Aoki Shin, Tomiyama Yumiko, Kageyama Yoshiyuki, Yamada Yasuyuki, Shiro Motoo, Kimura Eiichi: Photolysis of the Sulfonamide Bond of Metal Complexes of N-Dansyl-1,4,7,10-Tetraazacyclododecane in Aqueous Solution: A Mechanistic Study and Application to the Photorepair of cis,syn-Cyclobutane Thymine Photodimer. Chem Asian J 2009, 4, 561. <http://dx.doi.org/10.1002/asia.200800428>
• Domratcheva Tatiana, Schlichting Ilme: Electronic Structure of (6−4) DNA Photoproduct Repair Involving a Non-Oxetane Pathway. J Am Chem Soc 2009, 131, 17793. <http://dx.doi.org/10.1021/ja904550d>
• Song Qin-Hua, Tang Wen-Jian, Ji Xue-Bao, Wang Hong-Bo, Guo Qing-Xiang: Do Photolyases Need To Provide Considerable Activation Energy for the Splitting of Cyclobutane Pyrimidine Dimer Radical Anions?. Chem Eur J 2007, 13, 7762. <http://dx.doi.org/10.1002/chem.200700251>
• Belmadoui Noureddine, Encinas Susana, Climent Maria J., Gil Salvador, Miranda Miguel A.: Intramolecular Interactions in the Triplet Excited States of Benzophenone–Thymine Dyads. Chem Eur J 2006, 12, 553. <http://dx.doi.org/10.1002/chem.200500345>
• Song Qin-Hua, Wang Hong-Bo, Tang Wen-Jian, Guo Qing-Xiang, Yu Shu-Qin: Model studies of the (6–4) photoproduct photoreactivation: efficient photosensitized splitting of thymine oxetane units by covalently linked tryptophan in high polarity solvents. Org Biomol Chem 2006, 4, 291. <http://dx.doi.org/10.1039/b514921e>
• Tang Wen-Jian, Song Qin-Hua, Wang Hong-Bo, Yu Jing-yu, Guo Qing-Xiang: Efficient photosensitized splitting of the thymine dimer/oxetane unit on its modifying ?-cyclodextrin by a binding electron donor. Org Biomol Chem 2006, 4, 2575. <http://dx.doi.org/10.1039/b604529d>
• Weber Stefan: Light-driven enzymatic catalysis of DNA repair: a review of recent biophysical studies on photolyase. Biochim Biophys Acta Bioenerg 2005, 1707, 1. <http://dx.doi.org/10.1016/j.bbabio.2004.02.010>
• Morley Nick, Clifford Tim, Salter Leo, Campbell Sandra, Gould David, Curnow Alison: The green tea polyphenol (-)-epigallocatechin gallate and green tea can protect human cellular DNA from ultraviolet and visible radiation-induced damage. Photoderm Photoimm Photomed 2005, 21, 15. <http://dx.doi.org/10.1111/j.1600-0781.2005.00119.x>
• Kundu Lal Mohan, Linne Uwe, Marahiel Mohamed, Carell Thomas: RNA Is More UV Resistant than DNA: The Formation of UV-Induced DNA Lesions is Strongly Sequence and Conformation Dependent. Chem Eur J 2004, 10, 5697. <http://dx.doi.org/10.1002/chem.200305731>
• Morley N., Curnow A., Salter L., Campbell S., Gould D.: N-acetyl-l-cysteine prevents DNA damage induced by UVA, UVB and visible radiation in human fibroblasts. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 2003, 72, 55. <http://dx.doi.org/10.1016/j.jphotobiol.2003.06.004>
• Taylor John-Stephen: New structural and mechanistic insight into the A-rule and the instructional and non-instructional behavior of DNA photoproducts and other lesions. Mutat Res Fundam Mol Mech Mutagen 2002, 510, 55. <http://dx.doi.org/10.1016/S0027-5107(02)00252-X>
• Starikov E.B.: Quantum chemistry of nucleic acids: how it could help and when it is necessary. J Photochem Photobiol C Photochem Rev 2002, 3, 147. <http://dx.doi.org/10.1016/S1389-5567(02)00024-2>
• Zhang Li-Kang, Ren Yingjie, Rempel Don, Taylor John S., Gross Michael L.: Determination of photomodified oligodeoxynucleotides by exonuclease digestion, matrix-assisted laser desorption/ionization and post-source decay mass spectrometry. j am soc mass spectrom 2001, 12, 1127. <http://dx.doi.org/10.1016/S1044-0305(01)00291-4>
• Wang Yinsheng, Taylor John-Stephen, Gross Michael L.: Fragmentation of photomodified oligodeoxynucleotides adducted with metal ions in an electrospray-ionization ion-trap mass spectrometer. j am soc mass spectrom 2001, 12, 1174. <http://dx.doi.org/10.1016/S1044-0305(01)00302-6>
• Lee J.-H., Bae S.-H., Choi B.-S.: The Dewar photoproduct of thymidylyl(3'right-arrow5')- thymidine (Dewar product) exhibits mutagenic behavior in accordance with the "A rule". Proceedings of the National Academy of Sciences 2000, 97, 4591. <http://dx.doi.org/10.1073/pnas.080057097>
• Zamora Félix, Amo-Ochoa Pilar, Fischer Birgit, Schimanski Arnd, Lippert Bernhard: 5,5′-Diuracilylspezies aus Uracil und [AuCl4]−: Nucleobasen-Dimerisierung durch ein Metall. Angew Chem 1999, 111, 2415. <http://dx.doi.org/10.1002/(SICI)1521-3757(19990802)111:15<2415::AID-ANGE2415>3.0.CO;2-U>
• Wang Yinsheng, Taylor John -Stephen, Gross Michael L.: Differentiation of isomeric photomodified oligodeoxynucleotides by fragmentation of ions produced by matrix-assisted laser desorption ionization and electrospray ionization. j am soc mass spectrom 1999, 10, 329. <http://dx.doi.org/10.1016/S1044-0305(98)00158-5>
• Warren Mark A, Murray James B, Connolly Bernard A: Synthesis and characterisation of oligodeoxynucleotides containing thio analogues of (6-4) pyrimidine—pyrimidinone photo-dimers. Journal of Molecular Biology 1998, 279, 89. <http://dx.doi.org/10.1006/jmbi.1998.1719>
• Clivio Pascale, Fourrey Jean-Louis: Photochemistry of the thio-analogue of the DNA (6-4) photoproduct Dewar valence isomer: Structure of a new photoproduct. Tetrahetron Lett 1998, 39, 275. <http://dx.doi.org/10.1016/S0040-4039(97)10511-1>
• Delatour T., Douki T., D'Ham C., Cadet J.: Photosensitization of thymine nucleobase by benzophenone through energy transfer, hydrogen abstraction and one-electron oxidation. JOURNAL OF PHOTOCHEMISTRY AND PHOTOBIOLOGY B-BIOLOGY 1998, 44, 191. <http://dx.doi.org/10.1016/S1011-1344(98)00142-0>
• Ordoukhanian P., Taylor J.-S.: Solid Phase-Supported Thymine Dimers for the Construction of Dimer-Containing DNA by Combined Chemical and Enzymatic Synthesis: A Potentially General Method for the Efficient Incorporation of Modified Nucleotides into DNA. Nucleic Acids Research 1997, 25, 3783. <http://dx.doi.org/10.1093/nar/25.19.3783>
• Review. bchm 1997, 378, 1217. <http://dx.doi.org/10.1515/bchm.1997.378.11.1217>
• Hwang Geum-Sook, Kim Jong-Ki, Choi Byong-Seok: NMR Structural Studies of DNA Decamer Duplex Containing the Dewar Photoproduct of Thymidylyl(3'5')Thymidine. Conformational Changes of the Oligonucleotide Duplex by Photoconversion of a (6-4) Adduct to its Dewar Valence Isomer. Eur J Biochem 1996, 235, 359. <http://dx.doi.org/10.1111/j.1432-1033.1996.00359.x>