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Pure Appl. Chem., 2007, Vol. 79, No. 4, pp. 801-809

Porphyrins as spectroscopic sensors for conformational studies of DNA

Milan Balaz, Klaus Bitsch-Jensen, Angela Mammana, George A. Ellestad, Koji Nakanishi and Nina Berova

Department of Chemistry, Columbia University, 3000 Broadway, New York, NY 10027, USA

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  • Makarska-Bialokoz Magdalena: Fluorescence quenching effect of guanine interacting with water-soluble cationic porphyrin. Journal of Luminescence 2014, 147, 27. <>
  • Clavé Guillaume, Chatelain Grégory, Filoramo Arianna, Gasparutto Didier, Saint-Pierre Christine, Le Cam Eric, Piétrement Olivier, Guérineau Vincent, Campidelli Stéphane: Synthesis of a multibranched porphyrin–oligonucleotide scaffold for the construction of DNA-based nano-architectures. Org. Biomol. Chem. 2014, 12, 2778. <>
  • Strozik Tadeusz, Wolszczak Marian, Hilczer Maria: Radiolysis of 5,10,15,20-tetrakis(N-methyl-4-pyridyl)-porphyrin or 5,10,15,20-tetrakis(4-sulfonatophenyl)-porphyrin in aqueous solution in the presence and in the absence of DNA or human serum albumin. Radiation Physics and Chemistry 2013, 91, 156. <>
  • Manet Ilse, Manoli Francesco, Donzello Maria Pia, Viola Elisa, Masi Annalisa, Andreano Giuseppina, Ricciardi Giampaolo, Rosa Angela, Cellai Luciano, Ercolani Claudio, Monti Sandra: Pyrazinoporphyrazines with Externally Appended Pyridine Rings. 13. Structure, UV–Visible Spectral Features, and Noncovalent Interaction with DNA of a Positively Charged Binuclear (ZnII/PtII) Macrocycle with Multimodal Anticancer Potentialities. Inorg. Chem. 2013, 52, 321. <>
  • Joy Jimmy, Cheriya Rijo T., Nagarajan Kalaivanan, Shaji Anil, Hariharan Mahesh: Breakdown of Exciton Splitting through Electron Donor–Acceptor Interaction: A Caveat for the Application of Exciton Chirality Method in Macromolecules. J. Phys. Chem. C 2013, 117, 17927. <>
  • Makarska-Bialokoz Magdalena: Spectroscopic study of associated systems formed between water-soluble cationic porphyrins or their copper (II) complexes and nucleic building blocks. cent.eur.j.chem. 2013, 11, 1360. <>
  • Monaselidze Jamlet R., Kiladze Maya T., Gorgoshidze Maya Z., Khachidze David G., Bregadze Vasil G., Lomidze Eteri M., Lezhava Theimuraz A.: Microcalorimetric study of DNA–Cu(II)TOEPyP(4) porphyrin complex. J Therm Anal Calorim 2012, 108, 127. <>
  • Sargsyan Gevorg, MacLeod Brianna L., Tohgha Urice, Balaz Milan: Sequence and linker dependent chiral dimerization of DNA–porphyrin conjugates. Tedrahedron 2012, 68, 2093. <>
  • Yang Xiu-Li, Xie Ming-Hua, Zou Chao, He Yabing, Chen Banglin, O’Keeffe Michael, Wu Chuan-De: Porous Metalloporphyrinic Frameworks Constructed from Metal 5,10,15,20-Tetrakis(3,5-biscarboxylphenyl)porphyrin for Highly Efficient and Selective Catalytic Oxidation of Alkylbenzenes. J. Am. Chem. Soc. 2012, 134, 10638. <>
  • Sargsyan Gevorg, Balaz Milan: Porphyrin–DNA conjugates: porphyrin induced adenine–guanine homoduplex stabilization and interduplex assemblies. Org. Biomol. Chem. 2012, 10, 5533. <>
  • Stephenson Adam W. I., Partridge Ashton C., Filichev Vyacheslav V.: Synthesis of β-Pyrrolic-Modified Porphyrins and Their Incorporation into DNA. Chem Eur J 2011, 17, 6227. <>
  • Brückner Christian, Götz Daniel C. G., Fox Simon P., Ryppa Claudia, McCarthy Jason R., Bruhn Torsten, Akhigbe Joshua, Banerjee Subhadeep, Daddario Pedro, Daniell Heather W.: Helimeric Porphyrinoids: Stereostructure and Chiral Resolution of meso-Tetraarylmorpholinochlorins. J Am Chem Soc 2011, 133, 8740. <>
  • Choi Jung Kyu, Sargsyan Gevorg, Shabbir-Hussain Murtaza, Holmes Andrea E., Balaz Milan: Chiroptical Detection of Condensed Nickel(II)-Z-DNA in the Presence of the B-DNA Via Porphyrin Exciton Coupled Circular Dichroism. Chem B 2011, 115, 10182. <>
  • Zhou Hui, Johnson Andrew T., Wiest Olaf, Zhang Lilu: Incorporation of porphyrin acetylides into duplexes of the simplified nucleic acid GNA. Org Biomol Chem 2011, 9, 2840. <>
  • Stephenson Adam W. I., Bomholt Niels, Partridge Ashton C., Filichev Vyacheslav V.: Significantly Enhanced DNA Thermal Stability Resulting from Porphyrin H-Aggregate Formation in the Minor Groove of the Duplex. Chem Eur J of Chem Bio 2010, 11, 1833. <>
  • Fujimoto Kazuhisa, Aizawa Sayaka, Oota Ikko, Chiba Junya, Inouye Masahiko: Specific Induced Circular Dichroism and Enhanced B to Z Transitions of Duplexes Stabilized by Chromophore-Linked Alkynylnucleoside Residues. Chem Eur J 2010, 16, 2401. <>
  • Aydinoglu Sabriye, Biver Tarita, Secco Fernando, Venturini Marcella: Metal-complex formation and DNA interaction of 5, 10,15,20-tetrakis(1-methyl-4-pyridiyl)-porphine: Study of the mechanistic aspects. Int J Chem Kinet 2010, 42, 79. <>
  • Masaki Yoshiaki, Ohkubo Akihiro, Seio Kohji, Sekine Mitsuo: Synthesis of 6-N-(benzothiazol-2-yl)deoxyadenosine and its exciton-coupled circular dichroism. biorg med chem 2010, 18, 567. <>
  • Rühl Thomas, Stulz Eugen: Synthesis of new building blocks for use in supramolecular DNA architectures. Supramol Chem 2010, 22, 103. <>
  • Mammana Angela, Pescitelli Gennaro, Asakawa Tomohiro, Jockusch Steffen, Petrovic Ana G., Monaco Regina R., Purrello Roberto, Turro Nicholas J., Nakanishi Koji, Ellestad George A.: Role of Environmental Factors on the Structure and Spectroscopic Response of 5′-DNA-Porphyrin Conjugates Caused by Changes in the Porphyrin-Porphyrin Interactions. Chem Eur J 2009, 15, 11853. <>
  • Berova Nina, Pescitelli Gennaro, Petrovic Ana G., Proni Gloria: Probing molecular chirality by CD-sensitive dimeric metalloporphyrin hosts. Chem Commun 2009, 5958. <>
  • Biver Tarita, Secco Fernando, Venturini Marcella: Mechanistic aspects of the interaction of intercalating metal complexes with nucleic acids. Coord Chem Rev - 2008, 252, 1163. <>